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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015829454.1_cds_XP_016503745.1_17261
CDS Infomation

[gene=LOC107821800] [db_xref=GeneID:107821800] [protein=huntingtin-interacting protein 1-related protein-like] [protein_id=XP_016503745.1] [location=complement(join(128597..128671,128755..128912,128993..129107,129980..130033,130863..130970,131683..131772,134662..134841,134923..135013,135150..135368,135459..135619))] [gbkey=CDS]
Sequence

ATGTCGAGATTTGATTATCCAACACTCTCCCGGCAAGACATCATCGCCGTATTAGCCGAA
TCTCAACTAGCCACCGTCTCCGACCAAGATCTCCTCAAACCCACTCCCGACTTCGTCACC
AACCTCTACTCCACCGTTCTTCTCCATGTCGACTCTCTCCAGGAAGATGATGACCAGGTG
GATTTTGCGGCTCTGGAGCACCTAGAGAACCCCGATGTTCATGTGGACTCGTTTCGGATC
ATGAATTTGTTTCATAAGATACGGGAGATGTTGACTACTTTAGATTGTCCCGAGCCATTT
ACTCTCAGGGATTTAATCAAGCCTGACCCTGAACGCACTAGGTTCTTTGTCGGCGCCATG
CTCAATTTTTCTCTTCACAGGGACACTAAATTAAGTGCTATAAGTCCGATTGTGGAAGAG
CTGACTCTCATTGATGAGCAACGACGAGCTGTGGAGGCTAGAATATCTCAGATAAACGAA
GAGATTGCAGAATATACTGAATCAAGAGAAAGGGAGATGCCTCTGGTTCAAGAAATAGAC
TCTAATGTTAAGGAACTAAGGCAAACCATTTCTGGTCTTAACAATCACCAAATGTCCTTG
AAGGCCTCATTAAAAAAACTCAAGGAGAGGTCTAAAGAGATGGATGAGAAGATTTCTAAT
GCAGACTTTGTGTTGGTGCAAGCTGTTCATGAAAATGCCAATTTACGTTCTAAGATTGTC
CAATCACCGGTTAAGCTTCAGAGAGCACTGGAGGAAAAGAAATCATTTCAAGCTGAGGCA
AGGAATGCTGAAAGAGCAGCAATGCAGTCTTTTCAAAATAAAACTTCCATTCTTGAGGTT
TACACAAAGGCTCACCAAAAAATGTCCAAGCACTTCAATCAGATGCAGGCTATACAGGAG
CAGGTTAATTCAACTAAATCTATTGAGAAAGATATTAAGGTTCTCAAACAAAAGCTGAGT
GATGAGGAAGTACTGGACAAATCCCTTGAAGCTAAACTAGTTGAAAGGCAAGGAAAAGCG
GACCAATTGGAAGAATTAAGAAAGCAATTAAAGAAAGAAAGAGATCTTAGTTGTGAGGAG
GCTGCCAAAGAAATGAAATTTTTTAATTTGGAAATGGAATCAAAGAGGCATGGTCTTGAA
GCAAGGCAAAAAGAGGTGGAAGGTGTGCTTGCAGAGGCGGATGCAGTAACTGCAAAAATT
AATTCAGTAAGGGAGTCTGGAGCATCTNGGTCAATGATAGATACACTATAA

Peptide Sequence

PEP ID

XP_016503745.1
PEP Infomation

PREDICTED: huntingtin-interacting protein 1-related protein-like [Nicotiana tabacum]
Sequence

MSRFDYPTLSRQDIIAVLAESQLATVSDQDLLKPTPDFVTNLYSTVLLHVDSLQEDDDQV
DFAALEHLENPDVHVDSFRIMNLFHKIREMLTTLDCPEPFTLRDLIKPDPERTRFFVGAM
LNFSLHRDTKLSAISPIVEELTLIDEQRRAVEARISQINEEIAEYTESREREMPLVQEID
SNVKELRQTISGLNNHQMSLKASLKKLKERSKEMDEKISNADFVLVQAVHENANLRSKIV
QSPVKLQRALEEKKSFQAEARNAERAAMQSFQNKTSILEVYTKAHQKMSKHFNQMQAIQE
QVNSTKSIEKDIKVLKQKLSDEEVLDKSLEAKLVERQGKADQLEELRKQLKKERDLSCEE
AAKEMKFFNLEMESKRHGLEARQKEVEGVLAEADAVTAKINSVRESGASXSMIDTL

Transcript Sequence

Gene sequence data has not been registered.